Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001653annotation not available (460 aa)    
Predicted Functional Partners:
Dicer1
Dicer 1, ribonuclease type III.
    
 
 0.831
Aarsd1
alanyl-tRNA synthetase domain containing 1.
    
   0.775
Mvd
Mevalonate (diphospho) decarboxylase.
    
   0.764
Xrn2
5'-3' exoribonuclease 2.
      
 0.737
ENSMSIP00000004018
annotation not available
    
   0.722
Nudcd1
NudC domain containing 1.
    
   0.682
ENSMSIP00000012419
annotation not available
    
 
 0.679
Slbp
Stem-loop binding protein.
    
 
 0.679
Exosc5
Exosome component 5.
   
 0.670
L3mbtl2
L3MBTL2 polycomb repressive complex 1 subunit.
   
  
 0.643
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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