Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001658annotation not available (1925 aa)    
Predicted Functional Partners:
Sema3e
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E.
    
 0.998
Sema4a
annotation not available
    
 0.996
Nrp1
Neuropilin 1.
   
 0.972
Sema7a
Sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A.
    
 0.947
Sema3a
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A.
    
 0.941
Sema3b
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B.
    
 0.940
Gipc1
GIPC PDZ domain containing family, member 1.
    
 
 0.918
Sema4d
annotation not available
    
 0.905
Plxna3
Plexin A3.
    
0.896
Plxna1
Plexin A1.
    
0.896
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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