Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
6820408C15RikRIKEN cDNA 6820408C15 gene. (354 aa)    
Predicted Functional Partners:
ENSMSIP00000015013
annotation not available
    
 0.782
Itsn2
Intersectin 2.
    
 0.754
Tsc2
TSC complex subunit 2.
    
 0.625
Met
Met proto-oncogene.
    
 0.623
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
 0.623
Itsn1
Intersectin 1 (SH3 domain protein 1A).
    
 0.598
Myo9b
Myosin IXb.
    
 0.579
Ralbp1
ralA binding protein 1.
    
 0.548
Rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.534
Shld2
Shieldin complex subunit 2.
      
 0.528
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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