STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acsm1acyl-CoA synthetase medium-chain family member 1. (573 aa)    
Predicted Functional Partners:
Gbp5
Guanylate binding protein 5.
    
   0.943
Slc22a16
Solute carrier family 22 (organic cation transporter), member 16.
   
 
 0.941
Acsm5
acyl-CoA synthetase medium-chain family member 5.
   
  0.899
Acads
acyl-Coenzyme A dehydrogenase, short chain.
  
 
 0.880
Lipt1
Lipoyltransferase 1.
    
 0.877
Scp2
Sterol carrier protein 2, liver.
  
 
 0.874
Acsm4
acyl-CoA synthetase medium-chain family member 4.
   
  0.865
Acsm3
acyl-CoA synthetase medium-chain family member 3.
   
  0.865
Apba3
Amyloid beta (A4) precursor protein-binding, family A, member 3.
    
   0.858
Hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.811
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.