STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcdhb11Protocadherin beta 11. (793 aa)    
Predicted Functional Partners:
Pcdhb8
Protocadherin beta 8.
   
    0.766
Pcdhb10
Protocadherin beta 10.
   
    0.766
Pcdhb4
Protocadherin beta 4.
   
    0.765
Pcdhb6
Protocadherin beta 6.
   
    0.765
Pcdhb9
Protocadherin beta 9.
   
    0.764
Pcdhb12
Protocadherin beta 12.
   
    0.764
Pcdhb3
Protocadherin beta 3.
   
    0.663
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.