STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sox12SRY (sex determining region Y)-box 12. (314 aa)    
Predicted Functional Partners:
Gys1
Glycogen synthase 1, muscle.
    
 
 0.929
ENSMSIP00000030197
annotation not available
    
   0.788
Gys2
Glycogen synthase 2.
    
 
 0.786
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.709
Lef1
Lymphoid enhancer binding factor 1.
    
0.688
ENSMSIP00000013132
annotation not available
    
0.681
Jup
Junction plakoglobin.
    
 0.666
Sox6
SRY (sex determining region Y)-box 6.
    
0.625
Tcf7l1
Transcription factor 7 like 1 (T cell specific, HMG box).
    
0.624
Tcf7l2
Transcription factor 7 like 2, T cell specific, HMG box.
    
0.620
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.