Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Unc5dUnc-5 netrin receptor D. (956 aa)    
Predicted Functional Partners:
Ntn1
Netrin 1.
    
 0.994
Ntn3
Netrin 3.
    
 0.991
Ntn4
Netrin 4.
    
 0.984
Ntn5
Netrin 5.
    
 0.969
Neo1
Neogenin.
    
 0.967
ENSMSIP00000014463
annotation not available
    
 0.965
Gpc3
Glypican 3.
    
 
 0.904
Igdcc4
Immunoglobulin superfamily, DCC subclass, member 4.
    
 0.886
Src
Rous sarcoma oncogene.
    
 0.864
Yes1
YES proto-oncogene 1, Src family tyrosine kinase.
    
 0.858
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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