STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001726annotation not available (289 aa)    
Predicted Functional Partners:
Hcn2
Hyperpolarization-activated, cyclic nucleotide-gated K+ 2.
  
 
0.968
Hcn4
Hyperpolarization-activated, cyclic nucleotide-gated K+ 4.
  
 
0.924
Hcn3
Hyperpolarization-activated, cyclic nucleotide-gated K+ 3.
  
 
0.912
Pex5l
Peroxisomal biogenesis factor 5-like.
   
 
 0.633
ENSMSIP00000003883
annotation not available
 
      0.568
Scn5a
Sodium channel, voltage-gated, type V, alpha.
    
 0.504
Scn1a
Sodium channel, voltage-gated, type I, alpha.
   
 0.500
Cacna1c
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
    
 0.431
Cacna1d
Calcium channel, voltage-dependent, L type, alpha 1D subunit.
    
 0.421
Scn8a
Sodium channel, voltage-gated, type VIII, alpha.
    
 0.414
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.