Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001726annotation not available (289 aa)    
Predicted Functional Partners:
Hcn2
Hyperpolarization-activated, cyclic nucleotide-gated K+ 2.
  
 
0.986
Hcn4
Hyperpolarization-activated, cyclic nucleotide-gated K+ 4.
  
 
0.984
Hcn3
Hyperpolarization-activated, cyclic nucleotide-gated K+ 3.
  
 
0.949
ENSMSIP00000003883
annotation not available
 
   
  0.792
Scn1a
Sodium channel, voltage-gated, type I, alpha.
   
 0.664
Pex5l
Peroxisomal biogenesis factor 5-like.
   
 
 0.652
Scn9a
Sodium channel, voltage-gated, type IX, alpha.
    
 0.645
ENSMSIP00000000315
annotation not available
     
  0.644
Xkr8
X-linked Kx blood group related 8.
     
  0.644
Scn7a
Sodium channel, voltage-gated, type VII, alpha.
    
 0.635
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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