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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RalyhnRNP-associated with lethal yellow. (328 aa)    
Predicted Functional Partners:
Hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
  
0.937
ENSMSIP00000018691
annotation not available
   
0.936
Celf1
CUGBP, Elav-like family member 1.
    
 
 0.932
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.873
ENSMSIP00000035691
annotation not available
    
 0.841
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
 0.841
Hnrnpd
Heterogeneous nuclear ribonucleoprotein D.
    
 0.832
Tep1
Telomerase associated protein 1.
   
 0.822
Ttc41
Tetratricopeptide repeat domain 41.
   
 0.822
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
   
  0.813
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.