Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RalyhnRNP-associated with lethal yellow. (328 aa)    
Predicted Functional Partners:
ENSMSIP00000018691
annotation not available
   
  0.991
Hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
  0.991
Hnrnpd
Heterogeneous nuclear ribonucleoprotein D.
   
 0.961
Celf1
CUGBP, Elav-like family member 1.
    
 
 0.959
Ralyl
RALY RNA binding protein-like.
    
   0.954
ENSMSIP00000037470
annotation not available
    
 0.943
Khdrbs1
KH domain containing, RNA binding, signal transduction associated 1.
   
 
 0.921
ENSMSIP00000012414
annotation not available
   
 0.912
ENSMSIP00000024372
annotation not available
   
 0.912
ENSMSIP00000033569
annotation not available
   
 0.912
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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