STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slitrk6SLIT and NTRK-like family, member 6. (840 aa)    
Predicted Functional Partners:
Ptprs
Protein tyrosine phosphatase, receptor type, S.
    
 0.867
Slitrk5
SLIT and NTRK-like family, member 5.
   
 
  0.861
Slitrk1
SLIT and NTRK-like family, member 1.
   
 
  0.854
Ptprf
Protein tyrosine phosphatase, receptor type, F.
    
 0.852
Slitrk4
SLIT and NTRK-like family, member 4.
     
  0.852
Slitrk2
SLIT and NTRK-like family, member 2.
     
  0.852
Slitrk3
SLIT and NTRK-like family, member 3.
   
 
  0.845
ENSMSIP00000032999
annotation not available
    
  0.834
Phactr2
Phosphatase and actin regulator 2.
      
 0.799
Bmpr1a
Bone morphogenetic protein receptor, type 1A.
    
 0.724
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.