STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2cd4dC2 calcium-dependent domain containing 4D. (341 aa)    
Predicted Functional Partners:
Itsn2
Intersectin 2.
     
 0.745
Rims2
Regulating synaptic membrane exocytosis 2.
     
 0.705
Itsn1
Intersectin 1 (SH3 domain protein 1A).
     
 0.638
Ston2
Stonin 2.
    
 0.601
Slc22a20
Solute carrier family 22 (organic anion transporter), member 20.
    
 
 0.527
Slc32a1
Solute carrier family 32 (GABA vesicular transporter), member 1.
   
 
 0.513
Sh3rf3
SH3 domain containing ring finger 3.
    
  0.493
Rab3b
RAB3B, member RAS oncogene family.
   
 0.453
Rab3d
RAB3D, member RAS oncogene family.
   
 0.453
Rab3c
RAB3C, member RAS oncogene family.
   
 0.453
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.