STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2cd4dC2 calcium-dependent domain containing 4D. (341 aa)    
Predicted Functional Partners:
Itsn2
Intersectin 2.
     
 0.668
Rims2
Regulating synaptic membrane exocytosis 2.
     
 0.641
Ston2
Stonin 2.
    
 0.621
Itsn1
Intersectin 1 (SH3 domain protein 1A).
     
 0.601
ENSMSIP00000037621
annotation not available
     
  0.519
ENSMSIP00000037640
annotation not available
     
  0.519
Slc32a1
Solute carrier family 32 (GABA vesicular transporter), member 1.
   
 
 0.447
Tubgcp2
Tubulin, gamma complex associated protein 2.
    
 
 0.425
Rab27a
RAB27A, member RAS oncogene family.
    
 0.422
ENSMSIP00000037046
annotation not available
    
 0.422
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.