STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm9Predicted gene 9. (162 aa)    
Predicted Functional Partners:
Prrx1
Paired related homeobox 1.
   
 
  0.941
Alx3
Aristaless-like homeobox 3.
   
  
 0.912
Otp
Orthopedia homeobox.
   
  
 0.907
Prrxl1
Paired related homeobox protein-like 1.
   
    0.904
ENSMSIP00000036034
annotation not available
   
    0.840
Timm13
Translocase of inner mitochondrial membrane 13.
    
   0.761
Tlx1
T cell leukemia, homeobox 1.
    
 
 0.741
Tlx3
T cell leukemia, homeobox 3.
    
 
 0.741
Tlx2
T cell leukemia, homeobox 2.
    
 
 0.741
ENSMSIP00000019418
annotation not available
    
 
 0.738
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.