STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm9Predicted gene 9. (162 aa)    
Predicted Functional Partners:
Tlx1
T cell leukemia, homeobox 1.
    
 
 0.794
Tlx3
T cell leukemia, homeobox 3.
    
 
 0.794
Tlx2
T cell leukemia, homeobox 2.
    
 
 0.794
Prrx1
Paired related homeobox 1.
     
 0.620
ENSMSIP00000010631
annotation not available
   
 
 0.618
Ldb1
LIM domain binding 1.
    
 0.551
Ldb2
LIM domain binding 2.
    
 0.551
4930550L24Rik
RIKEN cDNA 4930550L24 gene.
      
 0.544
Rhox12
Reproductive homeobox 12.
      
 0.449
Srf
Serum response factor.
    
 0.442
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.