STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcdhb19Protocadherin beta 19. (801 aa)    
Predicted Functional Partners:
Pcdhb20
Protocadherin beta 20.
  
   
0.905
Pcdhb21
Protocadherin beta 21.
  
   
0.897
Pcdhb16
Protocadherin beta 16.
  
   
0.896
Pcdhb18
Protocadherin beta 18.
  
   
0.894
Pcdhb17
Protocadherin beta 17.
  
   
0.891
Pcdhb3
Protocadherin beta 3.
  
   
0.569
Zfp804b
Zinc finger protein 804B.
      
 0.429
Myo9b
Myosin IXb.
    
  0.406
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.