Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arl4aADP-ribosylation factor-like 4A. (200 aa)    
Predicted Functional Partners:
Xrcc2
X-ray repair complementing defective repair in Chinese hamster cells 2.
    
 
 0.791
Gbf1
Golgi-specific brefeldin A-resistance factor 1.
    
 0.763
Itsn2
Intersectin 2.
    
 0.746
Arfgap1
ADP-ribosylation factor GTPase activating protein 1.
   
 0.745
Copb2
Coatomer protein complex, subunit beta 2 (beta prime).
    
 0.734
Copb1
Coatomer protein complex, subunit beta 1.
   
 0.727
Gak
Cyclin G associated kinase.
    
 0.704
Copa
Coatomer protein complex subunit alpha.
    
 0.679
Arcn1
Archain 1.
   
 0.649
Pi4kb
Phosphatidylinositol 4-kinase beta.
    
 0.623
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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