Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001789annotation not available (165 aa)    
Predicted Functional Partners:
Slit2
Slit guidance ligand 2.
    
 
 0.940
Slit1
Slit guidance ligand 1.
    
 
 0.931
Robo1
Roundabout guidance receptor 1.
 
  
 0.921
Slit3
Slit guidance ligand 3.
    
 
 0.845
Robo2
Roundabout guidance receptor 2.
    
 0.844
ENSMSIP00000000833
annotation not available
 
      0.838
Robo4
Roundabout guidance receptor 4.
    
 0.794
Nell2
NEL-like 2.
    
 0.710
Nell1
NEL-like 1.
    
 0.708
Nyx
Nyctalopin.
    
 
 0.697
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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