STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Samhd1SAM domain and HD domain, 1. (658 aa)    
Predicted Functional Partners:
Dcaf1
DDB1 and CUL4 associated factor 1.
    
 
 0.978
Ccna2
Cyclin A2.
    
 
 0.955
Tk2
Thymidine kinase 2, mitochondrial.
    
 
 0.955
ENSMSIP00000014202
annotation not available
    
 
 0.928
ENSMSIP00000036440
annotation not available
    
 
 0.928
Ddb1
Damage specific DNA binding protein 1.
    
 
 0.902
Cd4
CD4 antigen.
      
 0.897
Cdk2
Cyclin-dependent kinase 2.
    
 
 0.893
Cdk3
Cyclin-dependent kinase 3.
    
 
 0.893
Ccna1
Cyclin A1.
    
 
 0.858
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.