STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chst11Carbohydrate sulfotransferase 11. (352 aa)    
Predicted Functional Partners:
Chst13
Carbohydrate sulfotransferase 13.
  
  
 
0.890
Dcn
Decorin.
     
 0.729
Csgalnact2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
     
 0.689
Bcan
Brevican.
     
 0.686
Csgalnact1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
     
 0.682
Chsy1
Chondroitin sulfate synthase 1.
     
 0.633
Chst15
Carbohydrate sulfotransferase 15.
      
 0.622
Hs2st1
Heparan sulfate 2-O-sulfotransferase 1.
      
 0.605
Chst7
Carbohydrate (N-acetylglucosamino) sulfotransferase 7.
      
 0.594
Cspg4
Chondroitin sulfate proteoglycan 4.
     
 0.591
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.