Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Chst11Carbohydrate sulfotransferase 11. (352 aa)    
Predicted Functional Partners:
Chst12
Carbohydrate sulfotransferase 12.
     
  0.855
Chst13
Carbohydrate sulfotransferase 13.
     
  0.853
Chst7
Carbohydrate (N-acetylglucosamino) sulfotransferase 7.
      
 0.804
Bcan
Brevican.
     
 0.648
Cspg4
Chondroitin sulfate proteoglycan 4.
     
 0.637
BC067074
cDNA sequence BC067074.
     
 0.637
Ndst2
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2.
      
 0.635
Chsy1
Chondroitin sulfate synthase 1.
     
 0.628
Chsy3
Chondroitin sulfate synthase 3.
     
 0.615
ENSMSIP00000017980
annotation not available
      
 0.595
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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