STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PalmParalemmin. (383 aa)    
Predicted Functional Partners:
ENSMSIP00000021459
annotation not available
 
  
 
 0.968
Snx16
Sorting nexin 16.
    
   0.821
Hmox2
Heme oxygenase 2.
    
   0.821
Hmox1
Heme oxygenase 1.
    
   0.684
Rabggtb
Rab geranylgeranyl transferase, b subunit.
    
   0.663
Lhb
Luteinizing hormone beta.
      
 0.621
Palm3
Paralemmin 3.
      
 0.615
Zdhhc13
Zinc finger, DHHC domain containing 13.
      
 0.573
Zdhhc17
Zinc finger, DHHC domain containing 17.
      
 0.524
Lzts1
Leucine zipper, putative tumor suppressor 1.
      
 0.522
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.