Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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[Homology]
Score
Man1aMannosidase 1, alpha. (746 aa)    
Predicted Functional Partners:
Mgat1
Mannoside acetylglucosaminyltransferase 1.
    
 0.909
Man1b1
Mannosidase, alpha, class 1B, member 1.
    
 0.907
Man1c1
Mannosidase, alpha, class 1C, member 1.
     
  0.855
Man1a2
Mannosidase, alpha, class 1A, member 2.
     
  0.855
Ganab
Alpha glucosidase 2 alpha neutral subunit.
   
 
 0.828
ENSMSIP00000036640
annotation not available
     
 0.775
Man2a2
Mannosidase 2, alpha 2.
     
 0.772
Cog4
Component of oligomeric golgi complex 4.
    
 0.733
Alg5
Asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase).
      
 0.717
Smim7
Small integral membrane protein 7.
    
  0.686
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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