Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrrc55Leucine rich repeat containing 55. (311 aa)    
Predicted Functional Partners:
Rgs20
Regulator of G-protein signaling 20.
      
 0.633
Ak9
Adenylate kinase 9.
    
  0.608
Kcnmb1
Potassium large conductance calcium-activated channel, subfamily M, beta member 1.
     
 0.588
Lrrc43
Leucine rich repeat containing 43.
    
 
 0.584
Iqca1l
IQ motif containing with AAA domain 1 like.
    
 
 0.573
Cpn1
Carboxypeptidase N, polypeptide 1.
     
  0.567
Wdr90
WD repeat domain 90.
    
   0.552
Zxdc
ZXD family zinc finger C.
    
 
 0.551
Tmc8
Transmembrane channel-like gene family 8.
    
 0.538
ENSMSIP00000012821
annotation not available
      
 0.537
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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