Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lingo4Leucine rich repeat and Ig domain containing 4. (618 aa)    
Predicted Functional Partners:
Ak9
Adenylate kinase 9.
    
  0.608
Wdr90
WD repeat domain 90.
    
   0.552
Ntng1
Netrin G1.
    
 0.470
Lrrc18
Leucine rich repeat containing 18.
  
     0.445
Lrrc10
Leucine rich repeat containing 10.
  
     0.443
Bmerb1
bMERB domain containing 1.
      
 0.439
Met
Met proto-oncogene.
    
 0.424
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
 0.424
Tonsl
Tonsoku-like, DNA repair protein.
    
  0.416
Lrrc30
Leucine rich repeat containing 30.
  
     0.402
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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