Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001833annotation not available (94 aa)    
Predicted Functional Partners:
Ctsg
Cathepsin G.
   
 
 0.778
Zfpm1
Zinc finger protein, multitype 1.
    
   0.742
Defb14
Defensin beta 14.
     
 0.707
Mpo
Myeloperoxidase.
   
  
 0.699
Ms4a3
Membrane-spanning 4-domains, subfamily A, member 3.
   
  
 0.669
Camp
Cathelicidin antimicrobial peptide.
   
  
 0.662
ENSMSIP00000007095
annotation not available
     
  0.633
AY761185
cDNA sequence AY761185.
     
  0.633
ENSMSIP00000010313
annotation not available
   
 
  0.463
Mmp8
Matrix metallopeptidase 8.
   
  
 0.436
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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