STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001845annotation not available (482 aa)    
Predicted Functional Partners:
Sin3a
Transcriptional regulator, SIN3A (yeast).
   
 0.997
Hdac2
Histone deacetylase 2.
  
 
0.996
Chd4
Chromodomain helicase DNA binding protein 4.
   
 0.996
Chd3
Chromodomain helicase DNA binding protein 3.
   
 0.995
Rbbp7
Retinoblastoma binding protein 7, chromatin remodeling factor.
   
 0.994
Mta2
Metastasis-associated gene family, member 2.
   
 0.993
Sap30
Sin3 associated polypeptide.
    
 0.991
Arid4b
AT rich interactive domain 4B (RBP1-like).
    
 0.991
Mta1
Metastasis associated 1.
    
 0.990
Rcor1
REST corepressor 1.
    
 0.989
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.