Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001858annotation not available (173 aa)    
Predicted Functional Partners:
Marcks
Myristoylated alanine rich protein kinase C substrate.
   
 
 0.967
Rmi1
RecQ mediated genome instability 1.
    
   0.935
Prkce
Protein kinase C, epsilon.
     
  0.855
Prkcd
Protein kinase C, delta.
     
  0.855
Prkch
Protein kinase C, eta.
     
  0.847
Prkcq
Protein kinase C, theta.
     
  0.843
ENSMSIP00000032569
annotation not available
    
 
 0.797
Tdrd3
Tudor domain containing 3.
    
   0.747
Map2
Microtubule-associated protein 2.
    
 
 0.666
ENSMSIP00000000067
annotation not available
   
   0.561
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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