Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001871annotation not available (176 aa)    
Predicted Functional Partners:
U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2.
    
 0.983
ENSMSIP00000002090
annotation not available
   
 0.977
Dhx15
DEAH (Asp-Glu-Ala-His) box polypeptide 15.
    
 0.956
Rbm5
RNA binding motif protein 5.
   
 0.930
Rbm6
RNA binding motif protein 6.
   
 0.924
ENSMSIP00000032291
annotation not available
   
 0.924
Snrpb2
U2 small nuclear ribonucleoprotein B.
    
   0.923
ENSMSIP00000011478
annotation not available
   
 
 0.922
Rbm17
RNA binding motif protein 17.
   
 
 0.922
Sf1
Splicing factor 1.
   
 0.854
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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