STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cep85Centrosomal protein 85. (761 aa)    
Predicted Functional Partners:
Sox5
SRY (sex determining region Y)-box 5.
    
   0.944
Sox13
SRY (sex determining region Y)-box 13.
    
   0.944
Cep192
Centrosomal protein 192.
    
 
 0.944
Plk4
Polo like kinase 4.
    
 
 0.820
Cep152
Centrosomal protein 152.
    
 
 0.813
Clec11a
C-type lectin domain family 11, member a.
    
  0.742
Ofd1
OFD1, centriole and centriolar satellite protein.
    
 
 0.718
Ccdc150
Coiled-coil domain containing 150.
      
 0.697
Met
Met proto-oncogene.
   
 0.687
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
   
 0.687
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.