ENSMSIP00000001919 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSMSIP00000001919

annotation not available (89 aa)

Predicted Functional Partners:

ENSMSIP00000006658

0.998

ENSMSIP00000007222

0.993

ENSMSIP00000014146

0.993

ENSMSIP00000029631

0.993

Snrpd2

0.989

ENSMSIP00000008440

0.989

ENSMSIP00000018725

0.989

ENSMSIP00000029580

0.989

Lsm3

0.988

ENSMSIP00000006975

0.987

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMSIP00000001919	ENSMSIP00000006658	ENSMSIP00000001919	ENSMSIP00000006658	annotation not available	annotation not available	0.998
ENSMSIP00000001919	ENSMSIP00000006975	ENSMSIP00000001919	ENSMSIP00000006975	annotation not available	annotation not available	0.987
ENSMSIP00000001919	ENSMSIP00000007222	ENSMSIP00000001919	ENSMSIP00000007222	annotation not available	annotation not available	0.993
ENSMSIP00000001919	ENSMSIP00000008440	ENSMSIP00000001919	ENSMSIP00000008440	annotation not available	annotation not available	0.989
ENSMSIP00000001919	ENSMSIP00000014146	ENSMSIP00000001919	ENSMSIP00000014146	annotation not available	annotation not available	0.993
ENSMSIP00000001919	ENSMSIP00000018725	ENSMSIP00000001919	ENSMSIP00000018725	annotation not available	annotation not available	0.989
ENSMSIP00000001919	ENSMSIP00000029580	ENSMSIP00000001919	ENSMSIP00000029580	annotation not available	annotation not available	0.989
ENSMSIP00000001919	ENSMSIP00000029631	ENSMSIP00000001919	ENSMSIP00000029631	annotation not available	annotation not available	0.993
ENSMSIP00000001919	Lsm3	ENSMSIP00000001919	ENSMSIP00000010460	annotation not available	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.988
ENSMSIP00000001919	Snrpd2	ENSMSIP00000001919	ENSMSIP00000005639	annotation not available	Small nuclear ribonucleoprotein D2.	0.989
ENSMSIP00000006658	ENSMSIP00000001919	ENSMSIP00000006658	ENSMSIP00000001919	annotation not available	annotation not available	0.998
ENSMSIP00000006658	ENSMSIP00000006975	ENSMSIP00000006658	ENSMSIP00000006975	annotation not available	annotation not available	0.995
ENSMSIP00000006658	ENSMSIP00000007222	ENSMSIP00000006658	ENSMSIP00000007222	annotation not available	annotation not available	0.998
ENSMSIP00000006658	ENSMSIP00000008440	ENSMSIP00000006658	ENSMSIP00000008440	annotation not available	annotation not available	0.997
ENSMSIP00000006658	ENSMSIP00000014146	ENSMSIP00000006658	ENSMSIP00000014146	annotation not available	annotation not available	0.998
ENSMSIP00000006658	ENSMSIP00000018725	ENSMSIP00000006658	ENSMSIP00000018725	annotation not available	annotation not available	0.997
ENSMSIP00000006658	ENSMSIP00000029580	ENSMSIP00000006658	ENSMSIP00000029580	annotation not available	annotation not available	0.997
ENSMSIP00000006658	ENSMSIP00000029631	ENSMSIP00000006658	ENSMSIP00000029631	annotation not available	annotation not available	0.998
ENSMSIP00000006658	Lsm3	ENSMSIP00000006658	ENSMSIP00000010460	annotation not available	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.996
ENSMSIP00000006658	Snrpd2	ENSMSIP00000006658	ENSMSIP00000005639	annotation not available	Small nuclear ribonucleoprotein D2.	0.998