Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001932annotation not available (351 aa)    
Predicted Functional Partners:
ENSMSIP00000037867
annotation not available
   
 0.995
Ubxn6
UBX domain protein 6.
    
 0.993
ENSMSIP00000003862
annotation not available
    
  0.975
ENSMSIP00000025861
annotation not available
    
  0.975
Aspscr1
Alveolar soft part sarcoma chromosome region, candidate 1 (human).
    
 0.968
Faf1
Fas-associated factor 1.
    
 0.964
Ufd1
Ubiquitin recognition factor in ER-associated degradation 1.
   
 
 0.964
Vcpip1
Valosin containing protein (p97)/p47 complex interacting protein 1.
    
 
 0.963
Nploc4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.963
Ubxn7
UBX domain protein 7.
   
 
 0.954
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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