Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rnf168Ring finger protein 168. (536 aa)    
Predicted Functional Partners:
Trp53bp1
Transformation related protein 53 binding protein 1.
    
 0.986
Brca1
Breast cancer 1, early onset.
    
 0.951
ENSMSIP00000003782
annotation not available
    
 0.926
ENSMSIP00000018755
annotation not available
    
 0.926
ENSMSIP00000030437
annotation not available
    
 0.926
ENSMSIP00000032507
annotation not available
    
 0.926
ENSMSIP00000036540
annotation not available
    
 0.926
ENSMSIP00000003263
annotation not available
    
  0.918
ENSMSIP00000021718
annotation not available
    
  0.893
ENSMSIP00000023026
annotation not available
    
  0.893
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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