Dpf3 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

Dpf3

D4, zinc and double PHD fingers, family 3. (370 aa)

Predicted Functional Partners:

Actl6b

0.998

Smarcd3

0.998

Arid1a

0.996

Arid1b

0.996

Dpf1

0.996

Smarcb1

0.995

Smarcd1

0.995

Smarcc2

0.995

Smarca4

0.995

ENSMSIP00000018964

0.995

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Actl6b	Arid1a	ENSMSIP00000009436	ENSMSIP00000000466	Actin-like 6B.	AT rich interactive domain 1A (SWI-like).	0.993
Actl6b	Arid1b	ENSMSIP00000009436	ENSMSIP00000018238	Actin-like 6B.	AT rich interactive domain 1B (SWI-like).	0.992
Actl6b	Dpf1	ENSMSIP00000009436	ENSMSIP00000028043	Actin-like 6B.	D4, zinc and double PHD fingers family 1.	0.999
Actl6b	Dpf3	ENSMSIP00000009436	ENSMSIP00000001942	Actin-like 6B.	D4, zinc and double PHD fingers, family 3.	0.998
Actl6b	ENSMSIP00000018964	ENSMSIP00000009436	ENSMSIP00000018964	Actin-like 6B.	annotation not available	0.987
Actl6b	Smarca4	ENSMSIP00000009436	ENSMSIP00000018395	Actin-like 6B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.996
Actl6b	Smarcb1	ENSMSIP00000009436	ENSMSIP00000005765	Actin-like 6B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.997
Actl6b	Smarcc2	ENSMSIP00000009436	ENSMSIP00000010123	Actin-like 6B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.997
Actl6b	Smarcd1	ENSMSIP00000009436	ENSMSIP00000007929	Actin-like 6B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.996
Actl6b	Smarcd3	ENSMSIP00000009436	ENSMSIP00000019447	Actin-like 6B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.994
Arid1a	Actl6b	ENSMSIP00000000466	ENSMSIP00000009436	AT rich interactive domain 1A (SWI-like).	Actin-like 6B.	0.993
Arid1a	Arid1b	ENSMSIP00000000466	ENSMSIP00000018238	AT rich interactive domain 1A (SWI-like).	AT rich interactive domain 1B (SWI-like).	0.998
Arid1a	Dpf1	ENSMSIP00000000466	ENSMSIP00000028043	AT rich interactive domain 1A (SWI-like).	D4, zinc and double PHD fingers family 1.	0.997
Arid1a	Dpf3	ENSMSIP00000000466	ENSMSIP00000001942	AT rich interactive domain 1A (SWI-like).	D4, zinc and double PHD fingers, family 3.	0.996
Arid1a	ENSMSIP00000018964	ENSMSIP00000000466	ENSMSIP00000018964	AT rich interactive domain 1A (SWI-like).	annotation not available	0.988
Arid1a	Smarca4	ENSMSIP00000000466	ENSMSIP00000018395	AT rich interactive domain 1A (SWI-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.999
Arid1a	Smarcb1	ENSMSIP00000000466	ENSMSIP00000005765	AT rich interactive domain 1A (SWI-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.999
Arid1a	Smarcc2	ENSMSIP00000000466	ENSMSIP00000010123	AT rich interactive domain 1A (SWI-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.999
Arid1a	Smarcd1	ENSMSIP00000000466	ENSMSIP00000007929	AT rich interactive domain 1A (SWI-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.999
Arid1a	Smarcd3	ENSMSIP00000000466	ENSMSIP00000019447	AT rich interactive domain 1A (SWI-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.998