Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001959annotation not available (143 aa)    
Predicted Functional Partners:
Mrps18a
Mitochondrial ribosomal protein S18A.
   
0.996
Mrps15
Mitochondrial ribosomal protein S15.
   
 0.993
ENSMSIP00000022539
annotation not available
   
 0.993
Mrps5
Mitochondrial ribosomal protein S5.
   
 0.988
Mrps2
Mitochondrial ribosomal protein S2.
   
 0.988
Mrps11
Mitochondrial ribosomal protein S11.
   
 0.987
ENSMSIP00000010447
annotation not available
   
 0.986
Mrps23
Mitochondrial ribosomal protein S23.
   
 0.984
Chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 0.982
Mrps31
Mitochondrial ribosomal protein S31.
   
 0.982
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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