Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Washc2WASH complex subunit 2`. (1275 aa)    
Predicted Functional Partners:
Washc4
WASH complex subunit 4.
   
 0.985
Washc5
WASH complex subunit 5.
   
 0.985
Washc3
WASH complex subunit 3.
    
 0.985
Washc1
WASH complex subunit 1.
    
 0.984
Snx27
Sorting nexin family member 27.
    
 0.973
Vps29
VPS29 retromer complex component.
    
 
 0.969
Capzb
Capping protein (actin filament) muscle Z-line, beta.
    
 0.953
Vps35
VPS35 retromer complex component.
    
 
 0.952
Slf1
SMC5-SMC6 complex localization factor 1.
    
 
 0.921
Fkbp15
FK506 binding protein 15.
   
 
 0.919
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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