STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem135Transmembrane protein 135. (458 aa)    
Predicted Functional Partners:
Pxmp4
Peroxisomal membrane protein 4.
      
 0.772
Acbd5
acyl-Coenzyme A binding domain containing 5.
    
 
 0.524
Acbd4
acyl-Coenzyme A binding domain containing 4.
    
 
 0.493
Tmem115
Transmembrane protein 115.
      
 0.489
Slc16a7
Solute carrier family 16 (monocarboxylic acid transporters), member 7.
      
 0.473
Ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.442
St6galnac3
annotation not available
      
 0.435
St6galnac4
annotation not available
      
 0.435
Nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
      
 0.412
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.