STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Col4a3bpCollagen, type IV, alpha 3 (Goodpasture antigen) binding protein. (751 aa)    
Predicted Functional Partners:
Csnk1g2
Casein kinase 1, gamma 2.
    
 0.939
ENSMSIP00000031659
annotation not available
    
 0.939
ENSMSIP00000031663
annotation not available
    
 0.939
Csnk1g1
Casein kinase 1, gamma 1.
    
 0.921
Rangap1
RAN GTPase activating protein 1.
    
   0.886
Ppp1r35
Protein phosphatase 1, regulatory subunit 35.
      
 0.879
Mospd2
Motile sperm domain containing 2.
    
 
 0.874
Nudcd3
NudC domain containing 3.
      
 0.872
Eya1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.836
Vapa
Vesicle-associated membrane protein, associated protein A.
    
 0.814
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.