STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Itga11Integrin alpha 11. (1188 aa)    
Predicted Functional Partners:
Itgb1
Integrin beta 1 (fibronectin receptor beta).
   
 0.998
Itgb5
Integrin beta 5.
   
 0.967
Itgb3
Integrin beta 3.
   
 0.967
Itgb7
Integrin beta 7.
   
 0.965
Itgb8
Integrin beta 8.
    
 0.959
Itgb4
Integrin beta 4.
   
 0.958
Itgb6
Integrin beta 6.
   
 0.957
Col1a1
Collagen, type I, alpha 1.
   
 0.947
Itgb2l
Integrin beta 2-like.
   
 0.943
Itgb2
Integrin beta 2.
   
 0.943
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.