Cldn34b3 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

Cldn34b3

Claudin 34B3. (209 aa)

Predicted Functional Partners:

ENSMSIP00000018681

0.720

Cldn5

0.720

Cldn24

0.719

Cldn23

0.712

Cldn11

0.711

ENSMSIP00000015240

0.710

Cldn10

0.708

Cldn1

0.703

Cldn19

0.703

Cldn7

0.703

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cldn1	Cldn10	ENSMSIP00000008939	ENSMSIP00000030529	Claudin 1.	Claudin 10.	0.855
Cldn1	Cldn11	ENSMSIP00000008939	ENSMSIP00000010819	Claudin 1.	Claudin 11.	0.857
Cldn1	Cldn19	ENSMSIP00000008939	ENSMSIP00000012785	Claudin 1.	Claudin 19.	0.855
Cldn1	Cldn23	ENSMSIP00000008939	ENSMSIP00000020111	Claudin 1.	Claudin 23.	0.889
Cldn1	Cldn24	ENSMSIP00000008939	ENSMSIP00000037122	Claudin 1.	Claudin 24.	0.855
Cldn1	Cldn34b3	ENSMSIP00000008939	ENSMSIP00000002012	Claudin 1.	Claudin 34B3.	0.703
Cldn1	Cldn5	ENSMSIP00000008939	ENSMSIP00000026946	Claudin 1.	Claudin 5.	0.855
Cldn1	Cldn7	ENSMSIP00000008939	ENSMSIP00000022479	Claudin 1.	Claudin 7.	0.855
Cldn1	ENSMSIP00000015240	ENSMSIP00000008939	ENSMSIP00000015240	Claudin 1.	annotation not available	0.855
Cldn1	ENSMSIP00000018681	ENSMSIP00000008939	ENSMSIP00000018681	Claudin 1.	annotation not available	0.945
Cldn10	Cldn1	ENSMSIP00000030529	ENSMSIP00000008939	Claudin 10.	Claudin 1.	0.855
Cldn10	Cldn11	ENSMSIP00000030529	ENSMSIP00000010819	Claudin 10.	Claudin 11.	0.861
Cldn10	Cldn19	ENSMSIP00000030529	ENSMSIP00000012785	Claudin 10.	Claudin 19.	0.855
Cldn10	Cldn23	ENSMSIP00000030529	ENSMSIP00000020111	Claudin 10.	Claudin 23.	0.905
Cldn10	Cldn24	ENSMSIP00000030529	ENSMSIP00000037122	Claudin 10.	Claudin 24.	0.855
Cldn10	Cldn34b3	ENSMSIP00000030529	ENSMSIP00000002012	Claudin 10.	Claudin 34B3.	0.708
Cldn10	Cldn5	ENSMSIP00000030529	ENSMSIP00000026946	Claudin 10.	Claudin 5.	0.860
Cldn10	Cldn7	ENSMSIP00000030529	ENSMSIP00000022479	Claudin 10.	Claudin 7.	0.855
Cldn10	ENSMSIP00000015240	ENSMSIP00000030529	ENSMSIP00000015240	Claudin 10.	annotation not available	0.865
Cldn10	ENSMSIP00000018681	ENSMSIP00000030529	ENSMSIP00000018681	Claudin 10.	annotation not available	0.929