STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Txnrd1Thioredoxin reductase 1. (612 aa)    
Predicted Functional Partners:
Pdhb
Pyruvate dehydrogenase (lipoamide) beta.
  
 0.953
Bckdhb
Branched chain ketoacid dehydrogenase E1, beta polypeptide.
  
 0.953
Dbt
Dihydrolipoamide branched chain transacylase E2.
 
 0.911
ENSMSIP00000020595
annotation not available
  
 0.906
ENSMSIP00000021500
annotation not available
  
 0.906
ENSMSIP00000031850
annotation not available
  
 0.906
ENSMSIP00000036513
annotation not available
  
 
 0.903
ENSMSIP00000036514
annotation not available
  
 
 0.903
Scly
Selenocysteine lyase.
   
 0.900
Bckdha
Branched chain ketoacid dehydrogenase E1, alpha polypeptide.
  
 
 0.895
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.