STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HpseHeparanase. (535 aa)    
Predicted Functional Partners:
Sdc1
Syndecan 1.
     
 0.922
ENSMSIP00000019697
annotation not available
  
  
 
0.844
Sdc3
Syndecan 3.
     
 0.612
Hspg2
Perlecan (heparan sulfate proteoglycan 2).
     
 0.579
Sulf2
Sulfatase 2.
     
 0.572
ENSMSIP00000037240
annotation not available
     
 0.571
Gpc3
Glypican 3.
     
 0.565
Gpc1
Glypican 1.
     
 0.563
Sdc4
Syndecan 4.
     
 0.556
Hgs
HGF-regulated tyrosine kinase substrate.
      
 0.537
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.