Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cep19Centrosomal protein 19. (193 aa)    
Predicted Functional Partners:
Rabl2
RAB, member RAS oncogene family-like 2.
   
 
 0.964
Cep350
Centrosomal protein 350.
    
 
 0.963
Cep83
Centrosomal protein 83.
      
 0.872
Ppp2r3c
Protein phosphatase 2, regulatory subunit B'', gamma.
    
   0.866
Fbf1
Fas (TNFRSF6) binding factor 1.
      
 0.754
Cep89
Centrosomal protein 89.
      
 0.740
Sclt1
Sodium channel and clathrin linker 1.
      
 0.739
ENSMSIP00000011633
annotation not available
      
 0.722
Ttbk2
Tau tubulin kinase 2.
      
 0.722
ENSMSIP00000012918
annotation not available
    
 
 0.675
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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