Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000002168annotation not available (116 aa)    
Predicted Functional Partners:
Rbm38
RNA binding motif protein 38.
   
   0.986
Rbfox1
RNA binding protein, fox-1 homolog (C. elegans) 1.
  
 
 0.891
Rbfox2
RNA binding protein, fox-1 homolog (C. elegans) 2.
  
 
 0.876
Elavl1
ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R).
  
   
 0.610
Elavl4
ELAV like RNA binding protein 4.
  
   
 0.607
Elavl3
ELAV like RNA binding protein 3.
  
   
 0.606
Elavl2
ELAV like RNA binding protein 1.
  
   
 0.600
Cap2
CAP, adenylate cyclase-associated protein, 2 (yeast).
   
    0.597
Sf3b4
Splicing factor 3b, subunit 4.
     
 0.587
Sf3b5
Splicing factor 3b, subunit 5.
     
 0.568
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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