Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Spag6Sperm associated antigen 6. (509 aa)    
Predicted Functional Partners:
Spag17
Sperm associated antigen 17.
   
 
 0.906
Spata4
Spermatogenesis associated 4.
   
 0.900
Cfap52
Cilia and flagella associated protein 52.
  
 
 0.881
Cfap20
Cilia and flagella associated protein 20.
    
 
 0.874
Kpnb1
Karyopherin (importin) beta 1.
   
 0.872
Cfap54
Cilia and flagella associated protein 54.
    
 
 0.859
Spata17
Spermatogenesis associated 17.
    
 
 0.859
Dpy30
Dpy-30, histone methyltransferase complex regulatory subunit.
    
 
 0.851
Cfap99
Cilia and flagella associated protein 99.
    
 0.846
Cfap69
Cilia and flagella associated protein 69.
    
 
 0.845
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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