Prtn3 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

Prtn3

Proteinase 3. (254 aa)

Predicted Functional Partners:

Ctsg

0.970

ENSMSIP00000010643

0.906

ENSMSIP00000010703

0.906

Mpo

0.888

ENSMSIP00000027534

0.885

Slpi

0.879

ENSMSIP00000037184

0.875

ENSMSIP00000037192

0.875

Serpina16

0.840

Serpina1f

0.840

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ctsg	ENSMSIP00000037184	ENSMSIP00000019970	ENSMSIP00000037184	Cathepsin G.	annotation not available	0.468
Ctsg	ENSMSIP00000037192	ENSMSIP00000019970	ENSMSIP00000037192	Cathepsin G.	annotation not available	0.468
Ctsg	Mpo	ENSMSIP00000019970	ENSMSIP00000031291	Cathepsin G.	Myeloperoxidase.	0.991
Ctsg	Prtn3	ENSMSIP00000019970	ENSMSIP00000002240	Cathepsin G.	Proteinase 3.	0.970
Ctsg	Serpina16	ENSMSIP00000019970	ENSMSIP00000037164	Cathepsin G.	Serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16.	0.468
Ctsg	Serpina1f	ENSMSIP00000019970	ENSMSIP00000037172	Cathepsin G.	Serine (or cysteine) peptidase inhibitor, clade A, member 1F.	0.468
Ctsg	Slpi	ENSMSIP00000019970	ENSMSIP00000025270	Cathepsin G.	Secretory leukocyte peptidase inhibitor.	0.600
ENSMSIP00000010643	Prtn3	ENSMSIP00000010643	ENSMSIP00000002240	annotation not available	Proteinase 3.	0.906
ENSMSIP00000010703	Prtn3	ENSMSIP00000010703	ENSMSIP00000002240	annotation not available	Proteinase 3.	0.906
ENSMSIP00000027534	Prtn3	ENSMSIP00000027534	ENSMSIP00000002240	annotation not available	Proteinase 3.	0.885
ENSMSIP00000037184	Ctsg	ENSMSIP00000037184	ENSMSIP00000019970	annotation not available	Cathepsin G.	0.468
ENSMSIP00000037184	Prtn3	ENSMSIP00000037184	ENSMSIP00000002240	annotation not available	Proteinase 3.	0.875
ENSMSIP00000037192	Ctsg	ENSMSIP00000037192	ENSMSIP00000019970	annotation not available	Cathepsin G.	0.468
ENSMSIP00000037192	Prtn3	ENSMSIP00000037192	ENSMSIP00000002240	annotation not available	Proteinase 3.	0.875
Mpo	Ctsg	ENSMSIP00000031291	ENSMSIP00000019970	Myeloperoxidase.	Cathepsin G.	0.991
Mpo	Prtn3	ENSMSIP00000031291	ENSMSIP00000002240	Myeloperoxidase.	Proteinase 3.	0.888
Prtn3	Ctsg	ENSMSIP00000002240	ENSMSIP00000019970	Proteinase 3.	Cathepsin G.	0.970
Prtn3	ENSMSIP00000010643	ENSMSIP00000002240	ENSMSIP00000010643	Proteinase 3.	annotation not available	0.906
Prtn3	ENSMSIP00000010703	ENSMSIP00000002240	ENSMSIP00000010703	Proteinase 3.	annotation not available	0.906
Prtn3	ENSMSIP00000027534	ENSMSIP00000002240	ENSMSIP00000027534	Proteinase 3.	annotation not available	0.885