STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clec5aC-type lectin domain family 5, member a. (190 aa)    
Predicted Functional Partners:
ENSMSIP00000005339
annotation not available
   
 0.979
Hcst
Hematopoietic cell signal transducer.
    
 0.855
Clec4a2
C-type lectin domain family 4, member a2.
   
  
0.698
Syk
Spleen tyrosine kinase.
    
 0.685
Clec4d
C-type lectin domain family 4, member d.
   
 
0.667
Trem1
Triggering receptor expressed on myeloid cells 1.
   
  
 0.657
ENSMSIP00000029184
annotation not available
   
 0.609
Gtf2a2
General transcription factor II A, 2.
      
 0.542
Ly75
Lymphocyte antigen 75.
      
 0.527
ENSMSIP00000003711
annotation not available
   
0.505
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.