Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc112Coiled-coil domain containing 112. (525 aa)    
Predicted Functional Partners:
Tex9
Testis expressed gene 9.
    
 
 0.951
Pggt1b
Protein geranylgeranyltransferase type I, beta subunit.
 
    
 0.599
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.561
Mcoln3
Mucolipin 3.
      
 0.544
Tex29
Testis expressed 29.
      
 0.531
Nexmif
Neurite extension and migration factor.
      
 0.529
Esyt1
Extended synaptotagmin-like protein 1.
    
 
 0.526
Nme8
NME/NM23 family member 8.
    
 0.525
Ltbr
Lymphotoxin B receptor.
    
   0.517
ENSMSIP00000022726
annotation not available
     
 0.512
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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