STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rai14Retinoic acid induced 14. (977 aa)    
Predicted Functional Partners:
ENSMSIP00000035691
annotation not available
    
  0.687
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
  0.687
ENSMSIP00000037764
annotation not available
    
 0.605
Ift81
Intraflagellar transport 81.
    
 0.578
Wdr90
WD repeat domain 90.
    
 0.554
Ift22
Intraflagellar transport 22.
    
 0.536
Ubxn7
UBX domain protein 7.
    
 0.523
Ttc30b
Tetratricopeptide repeat domain 30B.
    
 0.515
ENSMSIP00000015611
annotation not available
    
 0.514
Cep170b
Centrosomal protein 170B.
    
 0.505
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.