Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dnaaf3Dynein, axonemal assembly factor 3. (577 aa)    
Predicted Functional Partners:
Tnnt1
Troponin T1, skeletal, slow.
  
 0.900
Tnnt3
Troponin T3, skeletal, fast.
   
 0.874
Tnnt2
Troponin T2, cardiac.
   
 0.874
Sp6
Trans-acting transcription factor 6.
    
   0.868
Smim20
Small integral membrane protein 20.
   
 0.855
Gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.842
ENSMSIP00000035708
annotation not available
   
 0.842
Zmynd10
Zinc finger, MYND domain containing 10.
   
  
 0.819
Dnaaf4
Dynein axonemal assembly factor 4.
      
 0.790
ENSMSIP00000018252
annotation not available
      
 0.783
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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