STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dnaaf3Dynein, axonemal assembly factor 3. (577 aa)    
Predicted Functional Partners:
Tnnt1
Troponin T1, skeletal, slow.
  
 0.946
Tnnt3
Troponin T3, skeletal, fast.
   
 0.932
Tnnt2
Troponin T2, cardiac.
   
 0.932
Smim20
Small integral membrane protein 20.
   
 0.926
Gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.926
ENSMSIP00000035708
annotation not available
   
 0.926
Cfap100
Cilia and flagella associated protein 100.
   
    0.865
Ccdc38
Coiled-coil domain containing 38.
   
    0.815
Dnaaf1
Dynein, axonemal assembly factor 1.
      
 0.753
Dnaaf4
Dynein axonemal assembly factor 4.
      
 0.736
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.