Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Phf14PHD finger protein 14. (943 aa)    
Predicted Functional Partners:
Tex10
Testis expressed gene 10.
    
   0.898
Macroh2a1
macroH2A.1 histone.
    
   0.838
Chd4
Chromodomain helicase DNA binding protein 4.
   
 
 0.810
ENSMSIP00000004951
annotation not available
   
 
 0.753
Tcf20
Transcription factor 20.
   
 
 0.753
Rai1
Retinoic acid induced 1.
   
 
 0.670
ENSMSIP00000015876
annotation not available
    
   0.669
Macroh2a2
macroH2A.2 histone.
    
   0.669
Srpk3
Serine/arginine-rich protein specific kinase 3.
      
 0.632
ENSMSIP00000002142
annotation not available
    
 
 0.604
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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