Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000003229annotation not available (356 aa)    
Predicted Functional Partners:
Tnnt2
Troponin T2, cardiac.
   
 0.999
Tnnc1
Troponin C, cardiac/slow skeletal.
   
 0.999
Actc1
Actin, alpha, cardiac muscle 1.
   
 0.997
Tnnt1
Troponin T1, skeletal, slow.
   
 0.996
Tnnt3
Troponin T3, skeletal, fast.
   
 0.996
Tnnc2
Troponin C2, fast.
   
 0.995
Acta2
Actin, alpha 2, smooth muscle, aorta.
   
 0.985
Acta1
Actin, alpha 1, skeletal muscle.
   
 0.985
Tpm1
Tropomyosin 1, alpha.
   
 0.978
Mybpc3
Myosin binding protein C, cardiac.
   
 
 0.977
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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