STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Man1c1Mannosidase, alpha, class 1C, member 1. (625 aa)    
Predicted Functional Partners:
Mgat1
Mannoside acetylglucosaminyltransferase 1.
    
 0.965
Man1b1
Mannosidase, alpha, class 1B, member 1.
   
 
0.954
Man1a
Mannosidase 1, alpha.
  
  
 
0.927
Man1a2
Mannosidase, alpha, class 1A, member 2.
  
  
 
0.900
Ganab
Alpha glucosidase 2 alpha neutral subunit.
   
 
 0.674
Man2a2
Mannosidase 2, alpha 2.
     
 0.595
ENSMSIP00000036640
annotation not available
     
 0.590
Nipal3
NIPA-like domain containing 3.
      
 0.517
Fam131c
Family with sequence similarity 131, member C.
      
 0.517
Pomgnt1
Protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase.
     
 0.494
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.