STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tma7Translational machinery associated 7. (64 aa)    
Predicted Functional Partners:
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
   
    0.866
ENSMSIP00000008405
annotation not available
   
    0.809
Ubl5
Ubiquitin-like 5.
   
    0.809
ENSMSIP00000007074
annotation not available
   
    0.807
ENSMSIP00000023564
annotation not available
   
    0.807
Pomp
Proteasome maturation protein.
   
    0.807
ENSMSIP00000005443
annotation not available
   
    0.794
ENSMSIP00000006037
annotation not available
   
    0.717
ENSMSIP00000016469
annotation not available
   
    0.717
ENSMSIP00000024078
annotation not available
   
    0.717
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.