Tma7 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

Tma7

Translational machinery associated 7. (64 aa)

Predicted Functional Partners:

ENSMSIP00000004602

0.828

ENSMSIP00000011075

0.828

ENSMSIP00000022320

0.828

ENSMSIP00000032185

0.828

ENSMSIP00000035713

0.828

Tomm7

0.787

Nedd8

0.774

Fau

0.771

ENSMSIP00000005443

0.761

Atp5e

0.754

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atp5e	ENSMSIP00000004602	ENSMSIP00000032624	ENSMSIP00000004602	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	annotation not available	0.696
Atp5e	ENSMSIP00000005443	ENSMSIP00000032624	ENSMSIP00000005443	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	annotation not available	0.949
Atp5e	ENSMSIP00000011075	ENSMSIP00000032624	ENSMSIP00000011075	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	annotation not available	0.696
Atp5e	ENSMSIP00000022320	ENSMSIP00000032624	ENSMSIP00000022320	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	annotation not available	0.696
Atp5e	ENSMSIP00000032185	ENSMSIP00000032624	ENSMSIP00000032185	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	annotation not available	0.696
Atp5e	ENSMSIP00000035713	ENSMSIP00000032624	ENSMSIP00000035713	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	annotation not available	0.696
Atp5e	Fau	ENSMSIP00000032624	ENSMSIP00000036352	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).	0.920
Atp5e	Nedd8	ENSMSIP00000032624	ENSMSIP00000037352	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	Neural precursor cell expressed, developmentally down-regulated gene 8.	0.414
Atp5e	Tma7	ENSMSIP00000032624	ENSMSIP00000003243	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	Translational machinery associated 7.	0.754
Atp5e	Tomm7	ENSMSIP00000032624	ENSMSIP00000030586	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	Translocase of outer mitochondrial membrane 7.	0.894
ENSMSIP00000004602	Atp5e	ENSMSIP00000004602	ENSMSIP00000032624	annotation not available	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	0.696
ENSMSIP00000004602	Fau	ENSMSIP00000004602	ENSMSIP00000036352	annotation not available	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).	0.993
ENSMSIP00000004602	Nedd8	ENSMSIP00000004602	ENSMSIP00000037352	annotation not available	Neural precursor cell expressed, developmentally down-regulated gene 8.	0.484
ENSMSIP00000004602	Tma7	ENSMSIP00000004602	ENSMSIP00000003243	annotation not available	Translational machinery associated 7.	0.828
ENSMSIP00000004602	Tomm7	ENSMSIP00000004602	ENSMSIP00000030586	annotation not available	Translocase of outer mitochondrial membrane 7.	0.737
ENSMSIP00000005443	Atp5e	ENSMSIP00000005443	ENSMSIP00000032624	annotation not available	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.	0.949
ENSMSIP00000005443	Fau	ENSMSIP00000005443	ENSMSIP00000036352	annotation not available	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).	0.648
ENSMSIP00000005443	Nedd8	ENSMSIP00000005443	ENSMSIP00000037352	annotation not available	Neural precursor cell expressed, developmentally down-regulated gene 8.	0.660
ENSMSIP00000005443	Tma7	ENSMSIP00000005443	ENSMSIP00000003243	annotation not available	Translational machinery associated 7.	0.761
ENSMSIP00000005443	Tomm7	ENSMSIP00000005443	ENSMSIP00000030586	annotation not available	Translocase of outer mitochondrial membrane 7.	0.807